Antibiotic susceptibility tests and resistance genes in Escherichia coli from humans, poultry and environmental samples in urban and rural Bangladesh (2017)

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• Published by: Environmental Information Data Centre
• Last updated: 11 February 2019
• Topic: Not added
• Licence: Other Licence ; View licence information

Summary

Antibiotic susceptibility tests are presented as the zone of inhibition using the disc-diffusion method, and categorized as resistant, intermediate or susceptible. DNA samples from antibiotic-resistant bacteria were analysed for the presence or absence of resistance genes using polymerase chain reaction (PCR). Laboratory analyses were conducted by trained staff at the International Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b). The aim of the study was to identify the antibiotic-susceptibility profiles and resistance genes of bacteria (Escherichia coli) obtained from humans, poultry and the environment. Bacterial isolates previously identified with resistance to third-generation cephalosporins or carbapenems were included in the analysis. Bacterial samples originated from rural households and poultry farms (broiler chickens) in Mirzapur, Tangail district; and urban food markets in Dhaka city, Bangladesh. Environmental samples included surface water, water supply, wastewater, soil, animal faeces (poultry and cattle) and solid waste. The survey was part of a wider research project, Spatial and Temporal Dynamics of Antimicrobial Resistance Transmission from the Outdoor Environment to Humans in Urban and Rural Bangladesh. The research was funded by NERC/BBSRC/MRC on behalf of the Antimicrobial Resistance Cross-Council Initiative award NE/N019555/1.

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• Added to data.gov.uk: 2019-03-20T15:39:35
• Access contraints: Not specified
• Harvest GUID: dda6dd55-f955-4dd5-bc03-b07cc8548a3d
• Extent: Latitude: 29.926° to 20.314°
• Extent: Longitude: 87.284° to 98.402°
• Spatial reference system: 4326
• Dataset reference date: 2019-02-11 (publication)
• Dataset reference date: 2018-12-15 (creation)
• Frequency of update: notPlanned
• Responsible party: International Centre for Diarrhoeal Disease Research, Bangladesh (author); Loughborough University (pointOfContact, author); Environmental Information Data Centre (custodian); NERC Environmental Information Data Centre (publisher)
• ISO 19139 resource type: dataset
• Metadata language: eng
• Source Metadata: XML
• Source Metadata: HTML

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© Loughborough University
© International Centre for Diarrhoeal Disease Research, Bangladesh
If you reuse this data, you should cite: Rousham, E.K., Islam, M.A., Unicomb, L., Asaduzzaman, M., Islam, R., Amin, B., Mozmader, T.I.M.A., Hossain, M.I., Rahman, M. (2019). Antibiotic susceptibility tests and resistance genes in Escherichia coli from humans, poultry and environmental samples in urban and rural Bangladesh (2017). NERC Environmental Information Data Centre https://doi.org/10.5285/dda6dd55-f955-4dd5-bc03-b07cc8548a3d