Identification

Title

Fungi and invertebrate environmental DNA detections in soil samples from 21 sites across England, 2023

Abstract

This dataset contains percentages, counts and metrics of fungi, invertebrates, and soil invertebrates from 656 soil samples collected from 21 Forestry England and partner sites across England throughout 2023. The sites included an ancient woodland National Nature Reserve, sitka spruce monocultures, heather moorland and breck heath. Important sites for nature recovery were also sampled: New Forest, Forest of Dean, and Wild Ennerdale. The soil samples were collected as part of the Forestry England 2023 eDNA Survey. The primary aim of the survey was to establish a baseline in order to detect future change alongside reference sites. Full details about this dataset can be found at https://doi.org/10.5285/07c32201-c374-4432-a00b-832dedee571e

Resource type

dataset

Resource locator

https://data-package.ceh.ac.uk/data/07c32201-c374-4432-a00b-832dedee571e

name: Download the data

description: Download a copy of this data

function: download

https://data-package.ceh.ac.uk/sd/07c32201-c374-4432-a00b-832dedee571e.zip

name: Supporting information

description: Supporting information available to assist in re-use of this dataset

function: information

Unique resource identifier

code

https://catalogue.ceh.ac.uk/id/07c32201-c374-4432-a00b-832dedee571e

codeSpace

doi:

Dataset language

eng

Spatial reference system

code identifying the spatial reference system

Classification of spatial data and services

Topic category

environment

biota

Keywords

Keyword set

keyword value

Environmental Monitoring Facilities

originating controlled vocabulary

title

GEMET - INSPIRE themes, version 1.0

reference date

date type

publication

effective date

2008-06-01

Geographic location

West bounding longitude

-6.452

East bounding longitude

1.768

North bounding latitude

55.812

South bounding latitude

49.864

Temporal reference

Temporal extent

Begin position

2023-01-01

End position

2023-12-31

Dataset reference date

date type

publication

effective date

2024-04-16

Frequency of update

Quality and validity

Lineage

The soil samples were collected by project officers, district ecologists, and contractors using standard soil sampling approaches and kits provided by NatureMetrics. Nine subsamples were mixed to create a sample. Five samples were taken within a 5ha plot. Between three and ten plots were used per site. Environmental DNA metabarcoding was completed on samples using three primers, ITS2, 18S, and COI by NatureMetrics. NatureMetrics analysed all samples, including their standard quality assurance procedure, and provided the data to Forestry England. Forestry England checked the data and prepared it (e.g., conversion to CSV) for EIDC submission. Please note that several GPS coordinates in the metadata are thought to be inaccurate and are highlighted as such.

Conformity

Conformity report

specification

title

Commission Regulation (EU) No 1089/2010 of 23 November 2010 implementing Directive 2007/2/EC of the European Parliament and of the Council as regards interoperability of spatial data sets and services

reference date

date type

publication

effective date

2010-12-08

degree

explanation

Data format

name of format

Comma-separated values (CSV)

version of format

Constraints related to access and use

Constraint set

Limitations on public access

Constraint set

Limitations on public access

Constraint set

Limitations on public access

If you reuse this data, you should cite: Stringer, A., Swan, D. (2024). Fungi and invertebrate environmental DNA detections in soil samples from 21 sites across England, 2023. NERC EDS Environmental Information Data Centre https://doi.org/10.5285/07c32201-c374-4432-a00b-832dedee571e

Responsible organisations

Responsible party

organisation name

Forestry England

email address

Andrew.Stringer@ForestryEngland.uk

web address

https://orcid.org/0000-0002-6192-275X

name: ORCID record

description: ORCID is an open, non-profit, community-driven effort to create and maintain a registry of unique researcher identifiers and a transparent method of linking research activities and outputs to these identifiers.

function: information

responsible party role

author

Responsible party

organisation name

NatureMetrics

email address

Daniel.Swan@naturemetrics.co.uk

web address

https://orcid.org/0000-0001-8978-8129

name: ORCID record

description: ORCID is an open, non-profit, community-driven effort to create and maintain a registry of unique researcher identifiers and a transparent method of linking research activities and outputs to these identifiers.

function: information

responsible party role

author

Responsible party

organisation name

Forestry England

email address

Andrew.Stringer@ForestryEngland.uk

responsible party role

pointOfContact

Responsible party

organisation name

Forestry England

email address

Andrew.Stringer@ForestryEngland.uk

responsible party role

owner

Responsible party

organisation name

email address

info@eidc.ac.uk

responsible party role

custodian

Responsible party

organisation name

email address

info@eidc.ac.uk

responsible party role

publisher

Metadata on metadata

Metadata point of contact

organisation name

full postal address

Lancaster Environment Centre, Library Avenue, Bailrigg

Lancaster

LA1 4AP

UK

email address

info@eidc.ac.uk

web address

https://eidc.ac.uk/

name: EIDC website

description: The Environmental Information Data Centre (EIDC) is the UK's national data centre for terrestrial and freshwater sciences.

function: information

responsible party role

pointOfContact

Metadata date

2024-11-14T13:52:19

Metadata language

eng