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Diet, gut microbiome and parasite data from wild rodents and diet shift data from captive rodents, 2014-2018

This dataset is a combination of data obtained from a longitudinal live trapping study of wild rodents in Wytham Woods, Oxford (51.796 N,-1.367 W); October 2015-18), a dissection study of rodents...

Multi-drug resistant bacteria in agricultural soil

This dataset identified bacteria able to grow in the presence of several Antibiotics in a British agricultural soil, by DNA stable isotope probing (SIP). The dataset was created with samples of the...

Faecal bacteria concentration in the River Wharfe from 2019 to 2021

This dataset contains faecal bacteria data (mainly E. coli but also some Intestinal enterococci) for the River Wharfe and its tributaries in Yorkshire. They were collected and analysed as part of...

Wild rodent tracking and gut microbiome data, Holly Hill, Wytham Woods, UK, 2018-2019

This data set is a combination of trapping data, tracking data, vegetation/habitat data and data on the gut microbiome composition of wild rodents caught in 4 ha study site in Holly Hill in Wytham...

Image and numerical data detailing interactions between metal reducing bacteria and metals (NERC grant NE/J024732/1)

These data show images recorded using a variety of methods of a model system of bacterial metal reduction. In all cases the bacteria grew from a pure culture of Geobacter sulfurreducens, and grew...

Operational taxonomic units for soil bacteria in the Wolf and Tamar catchments

This dataset contains operational taxonomic units for soil bacteria collected from various land use categories in the Wolf and Tamar catchments in South west England. A range of soils were targeted...

Wild rodent trapping, tracking and sampling for genetics and gut microbiome, Silwood Park, Berkshire, November 2014 to November 2015

This data set is a combination of trapping data, tracking data and data on the genetic relatedness and gut microbiome composition of wild rodents caught in 2.3 ha study site in Nash’s Copse,...

National Collection of Plant Pathogenic Bacteria (NCPPB)

An international reference culture collection underpinning Fera diagnostics, research and development, and collaboration with international institutes on plant health matters and statutory...

Standardised counts of bacteria, fungi and micro eukaryotes abundances across geo-linked sampling locations on grassland, UK (2016)

The data consist of standardised counts of taxon abundances (bacteria, fungi and micro eukaryotes) from soil samples collected from paired intensive and extensive grassland systems, including low...

High spatial resolution seasonal distributions of faecally-derived waterborne and sediment bacteria in standing waters, Glasgow, UK, 2016-2017

This dataset contains information about water quality based on faecal indicators at 15 lakes in the Greater Glasgow conurbation, Scotland. Lakes were sampled in winter (2016/17) and summer (2017)...

Operational taxonomic units for epilithon bacteria in the rivers Wolf and Tamar catchments

This dataset contains operational taxonomic units for epilithon (water samples): Approximate location of sampling sites was determined from maps to provide good spatial coverage of the Wold River...

Lipid biomarker data relating to anammox bacteria in sediment records containing Mediterranean sapropels (NERC Grant NE/N011112/1)

Spreadsheet containing three tabs of biomarker concentration data for three Mediterranean sapropel records. Core LC21 was collected at 1522m water depth in the Aegean Sea by the R/V Marion...

2012 - 2012 Centre for Environment, Fisheries & Aquaculture Science (Cefas) North Sea Conductivity-Temperature-Depth (CTD) Data - RV Endeavour 17/2012

Conductivity, Temperature & Depth (CTD) data gathered by the Centre for Environment, Fisheries and Aquaculture Science in the Botney Gut/Farne Deep areas of the North Sea from 7th-17th...

2010 - 2010 Centre for Environment, Fisheries & Aquaculture Science (Cefas) North Sea Conductivity-Temperature-Depth (CTD) Data - RV Endeavour 15/2010

Conductivity, Temperature & Depth (CTD) data gathered by the Centre for Environment, Fisheries and Aquaculture Science in the Botney Gut/Farne Deep areas of the North Sea from 4th-14th...

2012 - 2012 Centre for Environment, Fisheries & Aquaculture Science (Cefas) North Sea Conductivity-Temperature-Depth (CTD) Data - RV Endeavour 07/2012

Conductivity, Temperature & Depth (CTD) data gathered by the Centre for Environment, Fisheries and Aquaculture Science in the Botney Gut/Silver Pit area of the North Sea from 9th-14th April...

Nurdle characteristics with associated bacterial concentrations and virulence of Klebsiella isolates from Scottish beaches, 2022

This dataset holds realistic environmental concentrations of potential pathogens colonising microplastic beads (nurdles) collected from ten Scottish beaches. Observed measures include...

Antimicrobial Resistance surveillance data

Antimicrobial Resistance (AMR) data gives the results of antimicrobial sensitivity testing on Salmonella isolates from samples collected from poultry and other animal species under the statutory...

Compositional and growth assay data for tree-hole bacteria communities under differing pH conditions, sampled summer 2021, Wytham Woods, Oxford

The data comprises both compositional data and growth assay data from an experiment of wild bacterial communities in Wytham Woods, Oxford. The communities live in puddles of water in tree-holes...

Pest Reference List

A reference list of organisms (bacteria, fungi, insects, nematodes, viruses etc), their preferred name, synonyms, common names, pest status and distribution

Viable bioaerosol and particulate data from four sites representing different levels of endotoxin exposure in south east England, 2016-2018

The dataset was collected between 2016-2018. A range of different environments were sampled including urban and rural sites in the South East of England, a compost facility in the East of England...